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Draft genome sequence of the psychrophilic bacterium Lacinutrix jangbogonensis PAMC 27137T

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Title
Draft genome sequence of the psychrophilic bacterium Lacinutrix jangbogonensis PAMC 27137T
Authors
Lee, Yung Mi
Shin, Seung Chul
Baek, Kiwoon
Hwang, Chung Yeon
Hong, Soon Gyu
Chun, Jongsik
Lee, Hong Kum
Subject
Genetics & Heredity; Marine & Freshwater Biology
Keywords
Lacinutrix jangbogonensis; Psychrophilic bacterium; Genome sequence; Antarctica
Issue Date
2016
Citation
Lee, Yung Mi, et al. 2016. "Draft genome sequence of the psychrophilic bacterium Lacinutrix jangbogonensis PAMC 27137T". Marine Genomics, 23: 31-32.
Abstract
Lacinutrix jangbogonensis PAMC 27137T is a psychrophilic bacterial strain isolated from the marine sediment of the Ross Sea, Antarctica. Here we present an annotated draft genome sequence of the strain PAMC 27137T which showed the narrower range in the growth temperature than other type strains of the genus Lacinutrix. The draft genome of 4,017,559 bpwith a G+C content of 30.6% comprised 14 scaffolds of 46 contigs containing 3589 protein-coding genes and 46 RNA genes. The function of 2185 (60.1%) proteins was predicted and 1943 (53.4%) proteins were assigned to COG functional categories. Comparative analysis of the draft genome across other type strains may provide clues into the mechanism of growth in narrow temperature range.
DOI
http://dx.doi.org/10.1016/j.margen.2015.04.002
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