KOPRI Repository

Expression analysis of transcripts responsive to osmotic stress in Deschampsia antarctica Desv.

Cited 2 time in scopus
Metadata Downloads
Title
Expression analysis of transcripts responsive to osmotic stress in Deschampsia antarctica Desv.
Other Titles
남극좀새풀의 삼투스트레스 반응 유전자의 발현 분석
Authors
Lee, Jong Eun
Yim, Joung Han
Kim, Il-Chan
Kim, Ji Hyun
Park, Hyun
Park, Mira
Noh, Eun Kyeung
Lee, Hyoungseok
Subject
Biochemistry & Molecular Biology; Biotechnology & Applied Microbiology; Genetics & Heredity
Keywords
Deschampsia antarctica; macroarray; osmotic stress
Issue Date
2014
Citation
Lee, Jong Eun, et al. 2014. "Expression analysis of transcripts responsive to osmotic stress in Deschampsia antarctica Desv.". GENES & GENOMICS, 36(3): 283-291.
Abstract
Deschampsia antarctica Desv., the only monocot species thriving in the tough conditions of the Antarctic region, is surrounded by regions with snow and ice where available amount of liquid water is very limited. Considering the species as an invaluable resource for the identification of genes associated with tolerance to osmotic stress, we have characterized the physiological response and the changes in gene expression induced by PEG treatment using a cDNA macroarray. Since relative chlorophyll contents of leaves decreased to 69%, proline levels were changed significantly, and expression levels of dehydrin (DHN) and late embryogenesis abundant protein (LEA) were significantly up-regulated at 1 d after PEG treatment, we used corresponding plant samples as the material for gene expression analysis. As a result of hybridization and analysis of cDNA macroarray, we identified 44 and 20 transcripts that were up-regulated and down-regulated by PEG treatment respectively, and they were divided into several functional categories. Most of the up-regulated transcripts are involved in ‘Response to stimulus’, ‘Amino acid metabolism’, and ‘Respiration’. On the other hand, most of the down-regulated transcripts are involved in ‘Photosynthesis’ and ‘Translation’. Among the up-regulated transcripts, ?-1-pyrroline-5-carboxylate synthase 2 gene has shown the highest expression level at 1 d after PEG treatment suggesting its possible role as a main player for proline biosynthesis in D. antarctica under osmotic stress. Collectively, these data suggest that the transcripts differentially expressed under osmotic stress may represent candidate genes for dissecting molecular mechanism of adaptation to extreme environment for plants.
URI
http://repository.kopri.re.kr/handle/201206/6211
DOI
http://dx.doi.org/10.1007/s13258-013-0166-5
Files in This Item
General Conditions
      ROMEO Green
    Can archive pre-print and post-print or publisher's version/PDF
      ROMEO Blue
    Can archive post-print (ie final draft post-refereeing) or publisher's version/PDF
      ROMEO Yellow
    Can archive pre-print (ie pre-refereeing)
      ROMEO White
    Archiving not formally supported

    qrcode

    Items in DSpace are protected by copyright, with all rights reserved, unless otherwise indicated.

    Browse