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Expression of recombinant endochitinase from the Antarctic bacterium, Sanguibacter antarcticus KOPRI 21702 in Pichia pastoris by codon optimization

Cited 19 time in wos
Cited 23 time in scopus

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dc.contributor.authorKoh, Hye Yeon-
dc.contributor.authorKim, Il-Chan-
dc.contributor.authorLee, Sung Gu-
dc.contributor.authorNa, Deuk Chae-
dc.contributor.authorYim, Joung Han-
dc.contributor.authorLee, Hong Kum-
dc.contributor.authorPark, Heeyong-
dc.contributor.authorHan, Se Jong-
dc.coverage.spatialAntarctica-
dc.date.accessioned2018-03-20T13:48:48Z-
dc.date.available2018-03-20T13:48:48Z-
dc.date.issued2010-
dc.identifier.urihttps://repository.kopri.re.kr/handle/201206/6294-
dc.description.abstractAn endochitinase was previously purified and the gene was cloned from the psychrophilic Antarctic bacterium,Sanguibacter antarcticus (KCTC 13143). In the present study, recombinant endochitinase,rChi21702, was expressed using a yeast expression system (Pichia pastoris) and codon optimization. The expressed rChi21702 was purified by Phenyl-Sepharose column chromatography. Optimal expression yielded 1-mg purified enzyme from 1-L bioreactor culture. When p-NP-(GlcNAc)2 was used as a substrate, the specific activity of the enzyme was determined to be 20 U/mg. In vitro assays and thin-layer chromatography demonstrated that the recombinant enzyme has endochitinase activity that produces diacetyl-chitobiose as a dominant end product when chitooligomers, colloidal chitin, and the chromogenic p-NP-(GlcNAc)2 are used as substrates. Optimal activity for rChi21702 was observed at 37oC and a pH of 7.6. Interestingly, rChi21702 exhibited 63% of optimal activity at 10oC and 44% activity at 0oC. Taken together, the results indicate that rChi21702 has psychrotolerant endochitinase activity even after recombinant expression in yeast cells.-
dc.languageEnglish-
dc.publisherElsevier-
dc.subjectBiochemistry & Molecular Biology-
dc.subjectBiotechnology & Applied Microbiology-
dc.titleExpression of recombinant endochitinase from the Antarctic bacterium, Sanguibacter antarcticus KOPRI 21702 in Pichia pastoris by codon optimization-
dc.title.alternative코돈최적화에 의한 남극세균 상귀박터 안탁티쿠스 코프리 21702 유래의 내재키티네이즈의 피키아 파스토리스 내에서의 재조합 발현-
dc.typeArticle-
dc.identifier.bibliographicCitationKoh, Hye Yeon, et al. 2010. "Expression of recombinant endochitinase from the Antarctic bacterium, Sanguibacter antarcticus KOPRI 21702 in Pichia pastoris by codon optimization". <em>PROTEIN EXPRESSION AND PURIFICATION</em>, 71(1): 108-114.-
dc.citation.titlePROTEIN EXPRESSION AND PURIFICATION-
dc.citation.volume71-
dc.citation.number1-
dc.identifier.doi10.1016/j.pep.2010.01.017-
dc.citation.startPage108-
dc.citation.endPage114-
dc.description.articleClassificationSCI-
dc.description.jcrRateJCR 2008:72.72727272727273-
dc.subject.keywordAntarctica-
dc.subject.keywordCodon optimization-
dc.subject.keywordEndochitinases-
dc.subject.keywordPichia pastoris-
dc.subject.keywordRecombinant-
dc.identifier.localId2010-0017-
dc.identifier.scopusid2-s2.0-77049111005-
dc.identifier.wosid000275485900017-
Appears in Collections  
2006-2010, Procurement and utilization of polar genetic resources (06-10) / Lee, Hong Kum; Yim, Joung Han (PE06050, PE07050, PE08050, PE09050, PE10050)
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