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Complete mitochondrial genome of the Northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidea)

Cited 5 time in scopus
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Title
Complete mitochondrial genome of the Northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidea)
Other Titles
십각목 수상새아목 중국젓새우의 미토콘드리아 전체 염기서열과 구조 분석
Authors
Kim, Sanghee
Choi, Han-Gu
GI-SIK MIN
JOONG-KI PARK
JIYEON KIM
Subject
Genetics & Heredity
Keywords
Acetes chinensis; Mitochondrial genome; gene duplication; northern mauxia shrimp; trnS1
Issue Date
2012
Publisher
Informa
Citation
Kim, Sanghee, et al. 2012. "Complete mitochondrial genome of the Northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidea)". Mitochondrial DNA, 23(1): 28-30.
Abstract
Here, we report the first complete mitochondrial (mt) genome sequence of Northern mauxia shrimp Acetes chinensis (Decapoda, Dendrobranchiata, Sergestoidea). The genome sequence was 15,740 bp in size, and the gene content, gene order and transcriptional polarity were almost identical to the pancrustacean ground pattern, with the one exception that an extra trnS1AGC was adjacent to the original trnS1AGA. The two tandemly duplicated trnS1 showed high sequence similarity (82.3%) and almost identical secondary structure lacking a DHU arm. Comparison of codon usage suggests that these trnS1 genes were both functional. transcriptional polarity were almost identical to the pancrustacean ground pattern, with the one exception that an extra trnS1AGC was adjacent to the original trnS1AGA. The two tandemly duplicated trnS1 showed high sequence similarity (82.3%) and almost identical secondary structure lacking a DHU arm. Comparison of codon usage suggests that these trnS1 genes were both functional.
URI
http://repository.kopri.re.kr/handle/201206/6504
DOI
http://dx.doi.org/10.3109/19401736.2011.643878
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