KOPRI Repository

Complete genome of a metabolically-diverse marine bacterium Shewanella japonica KCTC 22435T

Cited 0 time in scopus
Metadata Downloads
Title
Complete genome of a metabolically-diverse marine bacterium Shewanella japonica KCTC 22435T
Other Titles
Shewanella japonica KCTC 22435T 균주의 전장유전체
Authors
Kim, Kyung Mo
Kim, Byung Kwon
Arshan Nasir
Choe, Hanna
Subject
Genetics & Heredity; Marine & Freshwater Biology
Keywords
Complete genome; Microbial Fuel Cell; Shewanella japonica
Issue Date
2017
Citation
Kim, Kyung Mo, et al. 2017. "Complete genome of a metabolically-diverse marine bacterium Shewanella japonica KCTC 22435T". MARINE GENOMICS, 35(0): 39-42.
Abstract
Shewanella japonica KCTC 22435T is a facultatively anaerobic, Gram-negative, mesophilic, rod-shaped bacterium isolated from sea water at the Pacific Institute of Bio-organic Chemistry of the Marine Experimental Station, Troitza Bay, Gulf of Peter the Great, Russia. Here, we report the complete genome of S. japonica KCTC 22435T, which consists of 4,975,677 bp (G + C content of 40.80%) with a single chromosome, 4036 protein-coding genes, 97 tRNAs and 8 rRNA operons. Genes detected in the genome reveal that the strain possesses a type II secretion system, cytochrome c family proteins with various numbers of heme-binding motifs, and metabolic pathways for utilizing diverse carbon sources, supporting the potential of KCTC 22435T to generate electricity in salinity culture conditions.
URI
http://repository.kopri.re.kr/handle/201206/6285
DOI
http://dx.doi.org/10.1016/j.margen.2017.05.004
Files in This Item
General Conditions
      ROMEO Green
    Can archive pre-print and post-print or publisher's version/PDF
      ROMEO Blue
    Can archive post-print (ie final draft post-refereeing) or publisher's version/PDF
      ROMEO Yellow
    Can archive pre-print (ie pre-refereeing)
      ROMEO White
    Archiving not formally supported

    qrcode

    Items in DSpace are protected by copyright, with all rights reserved, unless otherwise indicated.

    Browse