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Complete genome of a metabolically-diverse marine bacterium Shewanella japonica KCTC 22435T

Cited 1 time in wos
Cited 1 time in scopus
Title
Complete genome of a metabolically-diverse marine bacterium Shewanella japonica KCTC 22435T
Other Titles
Shewanella japonica KCTC 22435T 균주의 전장유전체
Authors
Kim, Kyung Mo
Kim, Byung Kwon
Arshan Nasir
Choe, Hanna
Subject
Genetics & HeredityMarine & Freshwater Biology
Keywords
Complete genomeMicrobial Fuel CellShewanella japonica
Issue Date
2017
Citation
Kim, Kyung Mo, et al. 2017. "Complete genome of a metabolically-diverse marine bacterium Shewanella japonica KCTC 22435T". MARINE GENOMICS, 35(0): 39-42.
Abstract
Shewanella japonica KCTC 22435T is a facultatively anaerobic, Gram-negative, mesophilic, rod-shaped bacterium isolated from sea water at the Pacific Institute of Bio-organic Chemistry of the Marine Experimental Station, Troitza Bay, Gulf of Peter the Great, Russia. Here, we report the complete genome of S. japonica KCTC 22435T, which consists of 4,975,677 bp (G + C content of 40.80%) with a single chromosome, 4036 protein-coding genes, 97 tRNAs and 8 rRNA operons. Genes detected in the genome reveal that the strain possesses a type II secretion system, cytochrome c family proteins with various numbers of heme-binding motifs, and metabolic pathways for utilizing diverse carbon sources, supporting the potential of KCTC 22435T to generate electricity in salinity culture conditions.
URI
https://repository.kopri.re.kr/handle/201206/6285
DOI
http://dx.doi.org/10.1016/j.margen.2017.05.004
Type
Article
Indexed
SCIE
Appears in Collections  
2016-2018, Bioinformatics study for analyzing marine microbial genomes (16-18) / Kim, Kyung Mo (PM16080; PM17080)
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