Gene family expansions in Antarctic winged midge as a strategy for adaptation to cold environments

Abstract

Parochlus steinenii is the only fying insect native to Antarctica. To elucidate the molecular mechanisms underlying its adaptation to cold environments, we conducted comparative genomic analyses of P. steinenii and closely related lineages. In an analysis of gene family evolution, 68 rapidly evolving gene families, involved in the innate immune system, unfolded protein response, DNA packaging, protein folding, and unsaturated fatty acid biosynthesis were detected. Some gene families were P. steinenii-specifc and showed phylogenetic instability. Acyl-CoA delta desaturase and heat shock cognate protein 70 (Hsc70) were representative gene families, showing signatures of positive selection with multiple gene duplication events. Acyl-CoA delta desaturases may play pivotal roles in membrane fuidity, and expanded Hsc70 genes may function as chaperones or thermal sensors in cold environments. These fndings suggest that multiple gene family expansions contributed to the adaptation of P. steinenii to cold environments.