Comparative Genome Analysis of Polar <i>Mesorhizobium</i> sp. PAMC28654 to Gain Insight into Tolerance to Salinity and Trace Element Stress

Abstract

In this study, Mesorhizobium sp. PAMC28654 was isolated from a soil sample collected from the polar region of Uganda. Whole-genome sequencing and comparative genomics were performed to better understand the genomic features necessary for Mesorhizobium sp. PAMC28654 to survive and thrive in extreme conditions and stresses. Additionally, diverse sequence analysis tools were employed for genomic investigation. The results of the analysis were then validated using wet-lab experiments. Genome analysis showed trace elements' resistant proteins (CopC, CopD, CzcD, and Acr3), exopolysaccharide (EPS)-producing proteins (ExoF and ExoQ), and nitrogen metabolic proteins (NarG, NarH, and NarI). The strain was positive for nitrate reduction. It was tolerant to 100 mM NaCl at 15 degrees C and 25 degrees C temperatures and resistant to multiple trace elements (up to 1 mM CuSO4<middle dot>5H(2)O, 2 mM CoCl2<middle dot>6H(2)O, 1 mM ZnSO4<middle dot>7H(2)O, 0.05 mM Cd(NO3)(2)<middle dot>4H(2)O, and 100 mM Na2HAsO4<middle dot>7H(2)O at 15 degrees C and 0.25 mM CuSO4<middle dot>5H(2)O, 2 mM CoCl2<middle dot>6H(2)O, 0.5 mM ZnSO4<middle dot>7H(2)O, 0.01 mM Cd(NO3)(2)<middle dot>4H(2)O, and 100 mM Na2HAsO4<middle dot>7H(2)O at 25 degrees C). This research contributes to our understanding of bacteria's ability to survive abiotic stresses. The isolated strain can be a potential candidate for implementation for environmental and agricultural purposes.