Complete genome sequence of opine-utilizing Variovorax sp. strain PAMC28711 isolated from an Antarctic lichen
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Title
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Complete genome sequence of opine-utilizing Variovorax sp. strain PAMC28711 isolated from an Antarctic lichen
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Authors
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Han, So-Ra
Lee, Joo-Ho
Kang, Seunghyun
Park, Hyun
Park, Tae-Jin
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Subject
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Biotechnology & Applied Microbiology
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Keywords
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Variovorax sp. PAMC28711; Complete genome sequence; Opine; Octopine; Antarctica lichen Himantormia sp.
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Issue Date
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2016
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Citation
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Han, So-Ra, et al. 2016. "Complete genome sequence of opine-utilizing Variovorax sp. strain PAMC28711 isolated from an Antarctic lichen". Journal of Biotechnology,, 225: 46-47.
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Abstract
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We report the complete genome sequence of Variovorax sp. strain PAMC28711 isolated from the Antarctic lichen Himantormia sp. Whole genome sequencing revealed opine oxidase- and octopine dehydrogenaserelated
gene clusters that are involved in octopine utilization. These data will lead to future genetic and biochemical studies on the unusual catabolic traits of opine and octopine utilization in extremely cold environments.
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DOI
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http://dx.doi.org/10.1016/j.jbiotec.2016.03.042
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Type
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Article
- Appears in Collections
- 2014-2016, Antarctic Organisms: Cold-Adaptation Mechanism and Its Application (14-16) / Park; Hyun (PE14070; PE15070; PE16070)
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