Differences in gene organization between type I and type II crustins in the morotoge shrimp, Pandalopsis japonica
DC Field | Value | Language |
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dc.contributor.author | Kim, Ah Ran | - |
dc.contributor.author | Kim, Hyun-Woo | - |
dc.contributor.author | Park, Wongyu | - |
dc.contributor.author | Park, Hyun | - |
dc.contributor.author | Kim, Meesun | - |
dc.contributor.author | Kim, Bo Kwang | - |
dc.contributor.author | Choi, Jung-Hwa | - |
dc.contributor.author | Yi, Myunggi | - |
dc.date.accessioned | 2018-03-20T13:47:13Z | - |
dc.date.available | 2018-03-20T13:47:13Z | - |
dc.date.issued | 2013 | - |
dc.identifier.uri | https://repository.kopri.re.kr/handle/201206/6261 | - |
dc.description.abstract | Crustins are cysteine-rich cationic antimicrobial peptides (AMPs) found in decapod crustaceans. Six novel crustin genes (Paj-CrusIc, Id, Ie, If, IIb and IIc) were identified in the morotoge shrimp, Pandalopsis japonica. Deduced amino acid sequences of isolated Paj-Crus genes ranged from 99 to 178 amino acid residues (10.6e17.8 kDa). Sequence analysis of nine isolated Paj-Crus genes and 100 different crustins from various decapod crustaceans revealed that a splice site and KXXXCP motif within the WAP domain may be the main criteria for classifying type I and II crustins, suggesting that the two types of crustin genes may have been generated by different processes. We also identified three intron-less crustin I genes (Paj-Crus Id, Ie and If) for the first time, which may have been generated by gene duplication. The tissue distribution profiles showed that Paj-CrusI genes were expressed predominantly in the gill and epidermis, whereas Paj-CrusII genes were expressed ubiquitously, suggesting that the two types of crustins may play different roles in various tissues or under different physiological conditions. Differing from previous results, hemocyte-specific crustin was not isolated from Pandalopsis japonica. This study showed that both types of crustin genes (types I and II) exist in decapod crustaceans and their primary structure and expression profiles differ from each other, suggesting that they may pla sequences of isolated Paj-Crus genes ranged from 99 to 178 amino acid residues (10.6e17.8 kDa). Sequence analysis of nine isolated Paj-Crus genes and 100 different crustins from various decapod crustaceans revealed that a splice site and KXXXCP motif within the WAP domain may be the main criteria for classifying type I and II crustins, suggesting that the two types of crustin genes may have been generated by different processes. We also identified three intron-less crustin I genes (Paj-Crus Id, Ie and If) for the first time, which may have been generated by gene duplication. The tissue distribution profiles showed that Paj-CrusI genes were expressed predominantly in the gill and epidermis, whereas Paj-CrusII genes were expressed ubiquitously, suggesting that the two types of crustins may play different roles in various tissues or under different physiological conditions. Differing from previous results, hemocyte-specific crustin was not isolated from Pandalopsis japonica. This study showed that both types of crustin genes (types I and II) exist in decapod crustaceans and their primary structure and expression profiles differ from each other, suggesting that they may pla | - |
dc.language | English | - |
dc.publisher | elsevier | - |
dc.subject | Immunology | - |
dc.subject | Marine & Freshwater Biology | - |
dc.subject | Veterinary Sciences | - |
dc.title | Differences in gene organization between type I and type II crustins in the morotoge shrimp, Pandalopsis japonica | - |
dc.title.alternative | type I and type II crustins 유전자 구조의 차이 | - |
dc.type | Article | - |
dc.identifier.bibliographicCitation | Kim, Ah Ran, et al. 2013. "Differences in gene organization between type I and type II crustins in the morotoge shrimp, Pandalopsis japonica". <em>FISH & SHELLFISH IMMUNOLOGY</em>, 35(1): 1176-1184. | - |
dc.citation.title | FISH & SHELLFISH IMMUNOLOGY | - |
dc.citation.volume | 35 | - |
dc.citation.number | 1 | - |
dc.identifier.doi | 10.1016/j.fsi.2013.07.031 | - |
dc.citation.startPage | 1176 | - |
dc.citation.endPage | 1184 | - |
dc.description.articleClassification | SCI | - |
dc.description.jcrRate | JCR 2011:2.1 | - |
dc.subject.keyword | Pandalopsis japonica | - |
dc.subject.keyword | crustins | - |
dc.subject.keyword | gene organization | - |
dc.subject.keyword | Fisheries | - |
dc.identifier.localId | 2013-0318 | - |
dc.identifier.scopusid | 2-s2.0-84883555894 | - |
dc.identifier.wosid | 000324849800014 | - |
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