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Immune gene discovery in the crucian carp Carassius auratus

Cited 12 time in wos
Cited 14 time in scopus

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dc.contributor.authorJae-sung Rhee-
dc.contributor.authorLee, Jae-Seong-
dc.contributor.author이철우-
dc.contributor.authorLee, Yong Sung-
dc.contributor.authorKim, Il-Chan-
dc.contributor.author김덕현-
dc.contributor.author정창범-
dc.date.accessioned2018-03-29T06:03:28Z-
dc.date.available2018-03-29T06:03:28Z-
dc.date.issued2014-
dc.identifier.urihttps://repository.kopri.re.kr/handle/201206/7311-
dc.description.abstractThe crucian carp Carassius auratus (Cyprinidae) is one of the important fish species in aquaculture. Although the crucian carp has several economic benefits, their immune system and gene information have not been investigated in depth as yet. Here, we performed the transcriptome analysis of C. auratus using the pyrosequencing method and selected several immune-related genes. Of unigenes obtained in this species, we identified a number of immune system-related genes (e.g. adhesive protein, antimicrobial protein, apoptosis- and cell cycle-related protein, cellular defense effector, immune regulator, pattern recognition protein, protease, protease inhibitor, reduction/oxidation-related protein, signal transduction-related protein and stress protein) that are potentially useful for studies on fish immunity. To be of public and practical use, we designed primer pairs of each gene from the crucian carp for realtime RT-PCR application and tested the amplicon identity of entire gene sets with the total RNA sample. For comparative analysis, we measured tissue-preferential transcript profiles of selected genes. This study will be helpful to extend our knowledge on the immune system of the crucian carp in comparative aspects and to develop the crucian carp as a potential model organism for aquatic quality monitoring in fish farming.-
dc.languageEnglish-
dc.titleImmune gene discovery in the crucian carp Carassius auratus-
dc.title.alternative수생생물 Carassius auratus에서 면역 관련 유전자 탐색-
dc.typeArticle-
dc.identifier.bibliographicCitationJae-sung Rhee, et al. 2014. "Immune gene discovery in the crucian carp Carassius auratus". <em>FISH & SHELLFISH IMMUNOLOGY</em>, 36(1): 240-251.-
dc.citation.titleFISH & SHELLFISH IMMUNOLOGY-
dc.citation.volume36-
dc.citation.number1-
dc.identifier.doi10.1016/j.fsi.2013.11.009-
dc.citation.startPage240-
dc.citation.endPage251-
dc.description.articleClassificationSCI-
dc.description.jcrRateJCR 2012:2.097-
dc.subject.keywordCarassius auratus-
dc.subject.keywordImmune-relevant genes-
dc.subject.keywordPyrosequencing-
dc.identifier.localId2014-0281-
dc.identifier.scopusid2-s2.0-84891166540-
dc.identifier.wosid000331671600029-
Appears in Collections  
2011-2016, Exploration of Future Resources in The Polar Oceans and Study on Their Utilization (K-POD) (11-16) / Yim; Joung Han (PM11090; PM12030; PM13030; PM14050; PM15050)
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